Updated: July 31, 2026
National and International Activities
The Microbiology section of PHL participates in international, national and regional programs for public health surveillance and response, including:
- PulseNet - National Molecular Subtyping Network for Foodborne Disease Surveillance
- World Health Organization (WHO) Collaborating Laboratory for Influenza Surveillance
- NREVSS - National Respiratory and Enteric Virus Surveillance System
- NARMS - National Antimicrobial Resistance Monitoring System
- FoodCORE - CDC Foodborne Centers for Outbreak Response Enhancement
- CaliciNet - National Molecular Subtyping Network for Foodborne Disease Surveillance
- LRN - CDC Laboratory Response Laboratory
Food Microbiology Laboratory
The Food Microbiology Laboratory protects the safety, health, and welfare of the citizens of South Carolina by ensuring that food is safe and wholesome. The laboratory works with the Bureau of Environmental Health and the Division of Acute Disease Epidemiology (DADE) to determine the source of causative agents in foodborne illness outbreaks.
The Food Microbiology Laboratory was awarded a grant from the Food and Drug Administration (FDA) to obtain ISO/IEC 17025:2005 accreditation and achieved this accreditation in March of 2016. As part of this grant, the Food Laboratory routinely tests frozen dairy treats for foodborne pathogens and, in 2015, the laboratory isolated and identified Listeria monocytogenes in Blue Bell Ice Cream which led to a recall of products. The Laboratory has also been awarded a grant to work with the Food and Drug Administration (FDA) Center for Veterinary Medicine (CVM) to perform routine testing of retail meat samples as part of a National Antimicrobial Resistance Monitoring System (NARMS) Cooperative Agreement Program to Enhance and Strengthen Antibiotic Resistance Surveillance in Retail Food Specimens.
Services Offered
Foodborne Pathogens Surveillance
- Laboratory tests for Staphylococcus aureus, Bacillus cereus, Clostridium perfringes, Salmonella, Campylobater, Listeria, E. coli O157:H7 and non-O157 STEC, Aerobic Plate Counts, E. coli/Coliform Plate Counts, and Enumeration of E. coli and coliform bacteria.
Identification of Select Agent from Food Samples
- Laboratory tests for Shigella and Vibrio and for the rapid detection and isolation of select biological agents.
Tuberculosis Laboratory
The South Carolina Tuberculosis (TB) Laboratory works closely with the Division of TB control to provide diagnostic testing services for isolation and identification of Mycobacterium tuberculosis complex (MTBC) and Mycobacterium avium complex (MAC). The laboratory works jointly with local public health departments, hospitals, and clinicians to perform contact investigations to ensure rapid results are received and timely and effective treatment is given to minimize the spread of TB.
Services Offered
- Identification of Mycobacterium tuberculosis complex (MTBC) and Mycobacterium avium complex (MAC).
- Same day detection of MTBC and rifampin resistance directly on specimens by the GeneXpert.
- Referrals for sensitivities
- Referrals for genotyping
Clinical Microbiology Laboratory
The Clinical Microbiology Laboratory is responsible for testing organisms of public health importance and works closely with the Division of Acute Disease Epidemiology (DADE), Association of Public Health Laboratories (APHL), and Centers for Disease Control (CDC). Testing includes conventional biochemical testing, antigen testing, PCR, serotyping, serogrouping, and shiga-toxin testing to confirm and identify human pathogens of a public health importance.
Services Offered
Enteric Cultures and Isolates to Include:
- For DADE Epidemiology only (in outbreak situations)
- Aeromonas species, Plesiomonas shigelloides, Yersinia enterocolitica
- Suspected cause of outbreak - toxins Bacillus cereus, Clostridium perfringens, and Staphylococcus aureus
- Requirement for all isolates or PCR+ specimens to be shipped to the PHL. Further identification, serotyping, PCR if available are performed on the following:
- Shiga-toxin producing Escherichia coli, Shigella species, Salmonella species, Vibriospecies.
- Cryptosporidium and Giardia lamdia are tested for DADE during suspected outbreaks.
- BioFire FilmArray GI panel which contains 21 targets to include Enteric Bacteria pathogens, Parasites and Viruses. This testing is performed per DADE Epidemiology request.
Other Organisms Which are a Concern for Public Health and are Tested Include the Following:
- Bordetella pertussis - ability to culture, identify
- Corynebacterium diphtheria - isolate submission required, confirm ID.
- CRE (Carbapenem-resistant Enterobacteriaceae) isolate submission required, confirm ID, AST
- CRPA (Carbapenem-resistant Psuedomonas aeruginosa) isolate submission required, confirm ID, AST
- Group A Streptococcus - outbreaks
- Hemophilus influenza - isolate submission required from invasive disease, confirm ID, serotype
- Legionella pneumophilia - Urine antigen testing
- Listeria monocytogenes - isolate submission required, confirm ID
- MRSA - outbreaks
- Neisseria gonorrhea - ability to culture, identify
- Neisseria meningitidis - isolate submission required, confirm ID, serogroup
Emergency Response & Special Pathogens Laboratory
The South Carolina Public Health Laboratory is part of the CDC Laboratory Response Network (LRN) and performs specific CDC assays to identify agents of bioterrorism. In addition, the South Carolina Public Health Lab provides targeted training, emergency response drills, and proficiency exercises for the South Carolina Sentinel Network.
The hospitals across the state are members of the South Carolina Sentinel Network. Network participants receive training and participate in exercises to enhance their ability to quickly detect the organisms.
Services Offered
The South Carolina Public Health Laboratory provides 24/7 bioterrorism testing capability for emergency situations. Suspected specimens are submitted through physicians, hospital laboratories, and the Federal Bureau of Investigations. If additional information is needed, please call (803) 896-0800 Monday through Friday during normal business hours (8 a.m.-4:30 p.m.).